Jiří Kléma

Associate Professor
Department of Computer Science
Czech Technical University
E-mail: klema@fel.cvut.cz
Page: http://ida.felk.cvut.cz/klema/

Fields of interest

data mining, machine learning, bioinformatics

Recent publications

Liskova, P., Dudakova, L., Krepelova, A., Klema, J. and Hysi, P. G.: Replication of SNP associations with keratoconus in a Czech cohort. PLOS ONE, February 16, 2017.

Andel, M., Klema, J., Krejcik, Z.: Network-Constrained Forest for Regularized Classification of Omics Data. Methods, Vol. 83, pp. 88–97, 15 July 2015.

Cellier, P., Charnois, T., Plantevit, M., Rigotti, C., Cremilleux, B., Gandrillon, O., Klema, J., Manguin, J. L.: Sequential Pattern Mining for Discovering Gene Interactions and their Contextual Information from Biomedical Texts. Journal of Biomedical Semantics, 6:27, 2015.

Dostalova Merkerova, M., Krejcik, Z., Belickova, M., Hrustincova, A., Klema, J., Stara, E., Zemanova, Z., Michalova, K., Cermak, J. and Jonasova A.: Genome-wide miRNA profiling in myelodysplastic syndrome with del(5q) treated with lenalidomide. European Journal of Haematology, Vol. 95, Issue 1 (July), pp. 35-43, 2015.

Libalova, H., Krckova, S., Uhlirova, K., Milcova, A., Schmuczerova, J., Ciganek, M., Klema, J., Machala, M., Sram, R., Topinka, J.: Genotoxicity but not the AhR-mediated activity of PAHs is inhibited by other components of complex mixtures of ambient air pollutants. Toxicology Letters 225/3, pp. 350-357, 2014.

Krejnik, M., Klema J.: Empirical Evidence of the Applicability of Functional Clustering through Gene Expression Classification. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 9:3, pp. 788-798, 2012.

Holec M., Klema J., Zelezny F., Tolar J.: Comparative Evaluation of Set-Level Techniques in Predictive Classification of Gene Expression Samples. BMC Bioinformatics, 13, Suppl. 10, S15, 2012.

Girmanova, E., Brabcova, I., Klema, J., Hribova, P., Wohlfartova, M., Skibova, J., Viklicky, O.: Molecular Networks Involved in The Immune Control of BK Polyomavirus. Clinical and Developmental Immunology, Vol. 2012, Article ID 972102, 9 p., 2012.

Libalova, H., Uhlirova, K., Klema, J., Machala, M., Sram, R., Ciganek, M. and Topinka, J.: Global Gene Expression Changes in Human Embryonic Lung Fibroblasts Induced by Organic Extracts from Respirable Air Particles. Particle and Fibre Toxicology, 9:1, 2012.

Klema, J., Novakova, L., Karel, F., Stepankova, O., Zelezny, F.: Sequential Data Mining: A Comparative Case Study in Development of Atherosclerosis Risk Factors. IEEE Transactions on Systems, Man, and Cybernetics: Part C: Applications and Reviews, Vol. 38, no. 1, pp. 3-15, 2008.